Publications of Jie Yang

Xianwei Bu, Dibyen Majumdar and Jie Yang.  D-optimal designs for multinomial logistic models.  Annals of Statistics, 48(2):983-1000, 2020. DOI: 
Lei Wang, Hani Aldirawi and Jie Yang.  Identifying zero-inflated distributions with a new r package izid.  Communications in Information and Systems, 20(1):23-44, 2020. DOI: 
Jeevan Jankar, Abhyuday Mandal and Jie Yang.  Optimal crossover designs for generalized linear models.  Journal of Statistical Theory and Practice, 14:23, 2020. DOI: 
Hani Aldirawi, Jie Yang and Ahmed A. Metwally.  Identifying appropriate probabilistic models for sparse discrete omics data.  In 2019 ieee embs international conference on biomedical & health informatics (Bhi), pages 1-4.  IEEE, 2019. DOI: 10.1109/BHI.2019.8834661. 
Hui Zheng, Jie Yang, Rong L. He and Stephen S.-T. Yau.  virus classification based on q-vectors.  Communications in Information and Systems, 19(1):81-94, 2019. DOI: 
Ahmed A. Metwally, Hani Aldirawi and Jie Yang.  A review on probabilistic models used in microbiome studies.  Communications in Information and Systems, 18(3):173-191, 2018. DOI: 
Hsin-Hsiung Huang, Shuai Hao, Saul Alarcon and Jie Yang.  Comparisons of classification methods for viral genomes and protein families using alignment-free vectorization.  Statistical Applications in Genetics and Molecular Biology, 17(4):20180004, 2018. DOI: 
Liping Tong, Tim Arnold, Jie Yang, Xinyong Tian, Cole Erdmann and Tina Esposito.  The association between outpatient follow-up visits and all-cause non-elective 30-day readmissions: a retrospective observational cohort study.  PLoS ONE, 13(7):e0200691, 2018. doi:10.1371/journal.pone.0200691. 
Ahmed A. Metwally, Jie Yang, Christian Ascoli, Yang Dai, Patricia W. Finn and David L. Perkins.  Metalonda: a flexible r-package for identifying time intervals of differentially abundant features in metagenomic longitudinal studies.  Microbiome, 6:32, 2018. doi:10.1186/s40168-018-0402-y. 
Martin Harrow, Thomas Jobe, Robert Faull and Jie Yang.  A 20-year multi-followup longitudinal study assessing whether antipsychotic medications contribute to work functioning in schizophrenia.  Psychiatry Research, 256:267-274, 2017. doi: 10.1016/j.psychres.2017.06.069. 
Rui Dong, Hui Zheng, Kun Tian, Shek-Chung Yau, Weiguang Mao, Wenping Yu, Changchuan Yin, Chenglong Yu, Rong Lucy He, Jie Yang and Stephen ST Yau.  Virus database and online inquiry system based on natural vectors.  Evolutionary Bioinformatics, 13:1-7, 2017. doi:10.1177/1176934317746667. 
Jie Yang, Liping Tong and Abhyuday Mandal.  D-optimal designs with ordered categorical data.  Statistica Sinica, 27:1879-1902, 2017. doi:10.5705/ss.202016.0210. 
Jie Yang, Abhyuday Mandal and Dibyen Majumdar.  Optimal designs for $2^k$ factorial experiments with binary response.  Statistica Sinica, 26:385-411, 2016. doi: 10.5705/ss.2013.265. 
Troy Hernandez and Jie Yang.  Descriptive statistics of the genome: phylogenetic classification of viruses.  Journal of Computational Biology, 23:810-820, 2016. doi: 10.1089/cmb.2013.0132. 
Jie Yang and Abhyuday Mandal.  D-optimal factorial designs under generalized linear models.  Communications in Statistics - Simulation and Computation, 44(9):2264-2277, 2015. doi: 10.1080/03610918.2013.815773. 
Hui Zheng, Changchuan Yin, Tung Hoang, Rong Lucy He, Jie Yang and Stephen S.-T. Yau.  Ebolavirus classification based on natural vectors.  DNA and Cell Biology, 34(6):418-428, 2015. doi: 10.1089/dna.2014.2678. 
Yue Yu, Zhihong Chen and Jie Yang.  Cluster-based regularized sliced inverse regression for forecasting macroeconomic variables.  J. Syst. Sci. Complex., 27(1):75--91, 2014. doi: 10.1007/s11424-014-3281-8.  MR3160793
Liping Tong, Hans W. Volkmer and Jie Yang.  Analytic solutions for D-optimal factorial designs under generalized linear models.  Electron. J. Stat., 8(1):1322--1344, 2014. doi: 10.1214/14-EJS926.  MR3263124
Chenglong Yu, Mo Deng, Lu Zheng, Rong Lucy He, Jie Yang and Stephen S.-T. Yau.  Dfa7, a new method to distinguish between intron-containing and intronless genes.  PLoS ONE, 9(7):e101363, 2014. doi:10.1371/journal.pone.0101363. 
Hsin-Hsiung Huang, Tu Xu and Jie Yang.  Comparing logistic regression, support vector machines and permanental classification methods in predicting hypertension.  In Bmc proceedings 2014, volume 8, Suppl. 1 of, pages S96.  2014. doi: 10.1186/1753-6561-8-S1-S96. 
Liping Tong, Jie Yang, Xue Han and Loren Velasquez.  The card game 24 and its application to math education.  International Journal of Mathematical Education in Science and Technology, 45(4):624-633, 2014. DOI:10.1080/0020739X.2013.868544. 
Hsin-Hsiung Huang, Chenglong Yu, Hui Zheng, Troy Hernandez, Shek-Chung Yau, Rong L. He, Jie Yang and Stephen S.-T. Yau.  Global comparison of multiple-segmented viruses in 12-dimensional genome space.  Molecular Phylogenetics and Evolution, 81:29-36, 2014. doi: 10.1016/j.ympev.2014.08.003. 
Tim Leung, Qingshuo Song and Jie Yang.  Outperformance portfolio optimization via the equivalence of pure and randomized hypothesis testing.  Finance Stoch., 17(4):839--870, 2013. doi: 10.1007/s00780-013-0213-8.  MR3105936
Chenglong Yu, Troy Hernandez, Hui Zheng, Shek-Chung Yau, Hsin-Hsiung Huang, Rong He, Jie Yang and Stephen Yau.  Real time classification of viruses in 12 dimensions.  PLoS ONE, 8(5):e64328, 2013. doi: 10.1371/journal.pone.0064328. 
Bo Xu, Ouri Wolfson, Jie Yang, Leon Stenneth, Philip S. Yu and Peter C. Nelson.  Real-time street parking availability estimation.  In 14th international conference on mobile data management (Ieee mdm 2013), volume 1 of, pages 16-25.  2013. doi: 10.1109/MDM.2013.12. 
Jie Yang, Abhyuday Mandal and Dibyen Majumdar.  Optimal designs for two-level factorial experiments with binary response.  Statist. Sinica, 22(2):885--907, 2012. MR2954366
J. Yang, K. Miescke and P. McCullagh.  Classification based on a permanental process with cyclic approximation.  Biometrika, 99(4):775--786, 2012. doi: 10.1093/biomet/ass047.  MR2999160
Erhan Bayraktar, Qingshuo Song and Jie Yang.  On the continuity of stochastic exit time control problems.  Stoch. Anal. Appl., 29(1):48--60, 2011. doi: 10.1080/07362994.2011.532020.  MR2763549
Liping Tong, Bamidele Tayo, Jie Yang and Richar S Cooper.  Compare the snp-based and gene-based association studies in detecting rare variants using unrelated individuals.  BMC Proceedings 2011, 5(S9):S41, 2011. doi:10.1186/1753-6561-5-S9-S41. 
Tim Leung, Qingshuo Song and Jie Yang.  Generalized hypothesis testing and maximizing the success probability in financial markets.  Proceedings of International Conference on Business Intelligence and Financial Engineering, accepted, 2011.
Zhishen Ye and Jie Yang.  Sliced inverse moment regression using weighted chi-squared tests for dimension reduction.  J. Statist. Plann. Inference, 140(11):3121--3131, 2010. doi: 10.1016/j.jspi.2010.04.015.  MR2659842
Liping Tong, Jie Yang and Richard Cooper.  Efficient calculation of p-value and power for quadratic form statistics in multilocus association testing.  Annals of Human Genetics, 74(3):275-285, 2010. doi: 10.1111/j.1469-1809.2010.00574.x. 
Jie Yang.  Cross-validation.  In Encyclopedia of research design, pages 314-316.  SAGE Publications, 2010.
Qiaoyan Hu, Shi Zhao and Jie Yang.  Confidence interval.  In Encyclopedia of research design, pages 211-215.  SAGE Publications, 2010.
Peter McCullagh and Jie Yang.  How many clusters?.  Bayesian Anal., 3(1):101--120, 2008. doi: 10.1214/08-BA304.  MR2383253
Peter McCullagh and Jie Yang.  Stochastic classification models.  In International Congress of Mathematicians. Vol. III, pages 669--686.  Eur. Math. Soc., Zürich, 2006. MR2275702
Shu Zhong Shi and Jie Yang.  Efficient subset for portfolio selection without short selling.  Acta Math. Appl. Sin., 26(2):286--299, 2003. MR2009155
Shu Zhong Shi and Jie Yang.  Efficient subset for portfolio selection.  Acta Math. Appl. Sin., 25(1):176--186, 2002. MR1926735
Jie Yang and Shuzhong Shi.  Classification of portfolio frontiers and efficient subset for portfolio selection.  Mathematics in Economics (Chinese), 18(1):8--18, 2001.
Hui Ling, Dehua Xiong and Jie Yang.  Petri net model for scheduling overhead traveling cranes and smelting furnaces.  Mathematics in Practice and Theory (Chinese), 26(1):61--65, 1996.
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